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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93903437_93904267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93903437 - 93904267

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTATGTTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTATGTTCACA

Flanking Amino Acid:

SIPLTDQGTTLYLNVTDLTT

Intron Amino Acid Position:

2198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

76.2

34.7

Major BPS

73.8

0.59

1.3

72.8

Major PPT

77.7

0.62

0.9

71.6

38.2

Minor 5ss

-1.6

45.7

42.5

Minor BPS

46.1

-0.3

2.4

62.91

43.8

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577