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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93904415_93905060_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

93904415 - 93905060

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCAATGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTACTTTGATA

Flanking Amino Acid:

LGYKIVYKPVGSNDPMEVFV

Intron Amino Acid Position:

2149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

71.6

40.1

Major BPS

0.85

0.9

39.9

Major PPT

59.3

0.21

1.2

60.7

38.4

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

71.9

0.68

1.2

78.71

31.1

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577