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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93919751_93920839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93919751 - 93920839

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

TTTTATATGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATAT

Flanking Amino Acid:

SEPLIGSETTLPMSSVRNLY

Intron Amino Acid Position:

1467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.1

68.3

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.2

0.61

73.6

40.4

Minor 5ss

42.5

-0.8

2.9

59.1

45.3

Minor BPS

60.7

0.41

1.6

78.95

37.3

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577