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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93922806_93922999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93922806 - 93922999

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATTTCTAACA

Flanking Amino Acid:

RDEGVELYAIGIKNADENEL

Intron Amino Acid Position:

1328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

100

1.24

0.5

100

Major PPT

0.43

1.1

75.4

33.4

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

58.6

0.27

1.6

68.11

38.5

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577