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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93949543_93949649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93949543 - 93949649

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGATT

5'SS Class:

major

3'SS Sequence:

GTGTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

TTGTGCATAATA

Flanking Amino Acid:

IPYKGGNTMTGEAIDYLVKN

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

39.4

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

36.5

-1.5

3.6

47.3

Minor BPS

55.9

0.18

71.99

40.5

Associated Gene:

Gene:

COL12A1

Ensembl Gene ID:

ENSAPLG00000012959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013741

93868544 - 93956120

87577