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Intron Name: Anas_platyrhynchos_platyrhynchos_3_93987882_93989478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93987882 - 93989478

Intron Length:

1597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTTTGTTTAATT

Flanking Amino Acid:

DGNNLTALFQGTTKPVNWPK

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

77.9

0.63

0.9

75.5

38.4

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

67.8

0.64

1.8

82.98

39.3

Associated Gene:

Gene:

TMEM30A

Ensembl Gene ID:

ENSAPLG00000013903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014516

93984755 - 93997535

12781