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Intron Name: Anas_platyrhynchos_platyrhynchos_3_94120174_94144809_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
94120174 - 94144809

Intron Length:
24636

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTACC

5'SS Class:
strong_major

3'SS Sequence:
TAACTTGTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
TATACTTTAATG

Flanking Amino Acid:
FTNLLEQERERLKKLLEQEK

Intron Amino Acid Position:
209

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.7
84
26.7

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
76.3
0.59
1
73.3
41.4

Minor 5ss
31.6
-2.1
2.6
37.4
40

Minor BPS
69.9
0.49
1.3
69.24
38.4

Associated Gene:

Gene:
FILIP1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94004035 - 94206910
202876