Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_94407534_94407980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94407534 - 94407980

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

QFFNERILKEEQELYQKEGL

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

78.8

0.72

67.9

40.1

Major PPT

80.6

0.69

27.2

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

MYO6

Ensembl Gene ID:

ENSAPLG00000002456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027124

94370302 - 94449592

79291

ENSAPLT00000002628

94370302 - 94449592

79291