Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_94413415_94417068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94413415 - 94417068

Intron Length:

3654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATAA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

SFISVGNKFKTQLNLLLEKL

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

73.9

32.9

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

42.8

-0.8

2.9

48.2

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

MYO6

Ensembl Gene ID:

ENSAPLG00000002456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027124

94370302 - 94449592

79291

ENSAPLT00000002628

94370302 - 94449592

79291