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Intron Name: Anas_platyrhynchos_platyrhynchos_3_94421375_94421458_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
94421375 - 94421458

Intron Length:
84

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGAGAG

5'SS Class:
strong_major

3'SS Sequence:
TTCTGTGTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATCAA

U12 Branch Point Sequence:
ATCAACCTAACT

Flanking Amino Acid:
ARLDPRLFCKALFKALGLNE

Intron Amino Acid Position:
733

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.9
0.94
0.8
75.1
35.1

Major BPS
70.2
0.5
1
72.1
33

Major PPT
82.7
0.74
0.9
80.2
37.3

Minor 5ss
29.8
-2.3
3.3
37.5
47.2

Minor BPS
52.4
0.15
1.9
73.35
42.8

Associated Gene:

Gene:
MYO6

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94370302 - 94449592
79291

94370302 - 94449592
79291