About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_94447743_94449392_F


Intron Information:

Intron Rank:
29

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
94447743 - 94449392

Intron Length:
1650

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTTGGTATT

5'SS Class:
major

3'SS Sequence:
TCTATGATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTATGAT

U12 Branch Point Sequence:
CCCTCTATGATT

Flanking Amino Acid:
PDKAPILLVAGKDDMDMCEL

Intron Amino Acid Position:
1138

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.2
75.6
39.9

Major BPS
72.3
0.55
1.1
63.4
42.8

Major PPT
77.6
0.62
0.9
73.8
40.3

Minor 5ss
36.8
-1.5
3.1
49.3
41.1

Minor BPS
49.5
0.04
1.6
62.82
42.5

Associated Gene:

Gene:
MYO6

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94370302 - 94449592
79291

94370302 - 94449592
79291