Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_94466145_94466637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94466145 - 94466637

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTGAA

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TAAGTCAAAATA

Flanking Amino Acid:

KALEQQFMQLLLPYLQSNLT

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

66.4

34.7

Major BPS

0.3

62.3

30.4

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

25.3

-2.8

3.2

27.1

39.3

Minor BPS

44.2

-0.4

1.9

53.57

Associated Gene:

Gene:

IMPG1

Ensembl Gene ID:

ENSAPLG00000002413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002418

94459180 - 94517038

57859