About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_94819870_94823230_F


Intron Information:

Intron Rank:
129521

Intron Class:
major

Intron Phase:

Intron Coordinates:
94819870 - 94823230

Intron Length:
3361

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTAAGGACC

5'SS Class:
major

3'SS Sequence:
CCTCTGATCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAT

U12 Branch Point Sequence:
TGCCTCTGATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1.1
72.7
35.1

Major BPS
79
0.72
1
69
38.9

Major PPT
67.1
0.38
0.9
60.9
33.8

Minor 5ss
36
-1.6
3.2
49.1
40.1

Minor BPS
48
-0.1
1.7
58.16
41.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94819506 - 94823536
4031