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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95458385_95459958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95458385 - 95459958

Intron Length:

1574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCTTTTTTATTT

Flanking Amino Acid:

ILLDMATRPAGQNPQGVEDK

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

90.1

24.5

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

58.3

0.34

1.6

71.36

40.7

Associated Gene:

Gene:

PHIP

Ensembl Gene ID:

ENSAPLG00000003512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027395

95392108 - 95492932

100825

ENSAPLT00000003708

95391000 - 95491945

100946

ENSAPLT00000046101

95391005 - 95491692

100688

ENSAPLT00000034946

95396444 - 95466563

70120