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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95461418_95462211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95461418 - 95462211

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAAGAC

5'SS Class:

major

3'SS Sequence:

TTGTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATGA

Flanking Amino Acid:

VQMICSSFSAGGMFLATGST

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

64.6

33.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.5

0.87

0.7

88.2

29.1

Minor 5ss

30.2

-2.3

3.4

37.9

41.6

Minor BPS

63.9

0.43

1.9

78.51

38.5

Associated Gene:

Gene:

PHIP

Ensembl Gene ID:

ENSAPLG00000003512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034946

95396444 - 95466563

70120

ENSAPLT00000027395

95392108 - 95492932

100825

ENSAPLT00000003708

95391000 - 95491945

100946

ENSAPLT00000046101

95391005 - 95491692

100688