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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95480582_95491593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

95480582 - 95491593

Intron Length:

11012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCATTTGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.5

0.48

69.1

36.7

Minor 5ss

37.2

-1.4

48.3

Minor BPS

55.5

0.25

1.8

75.31

42.2

Associated Gene:

Gene:

PHIP

Ensembl Gene ID:

ENSAPLG00000003512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046101

95391005 - 95491692

100688

ENSAPLT00000027395

95392108 - 95492932

100825

ENSAPLT00000003708

95391000 - 95491945

100946