Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_95491946_95492848_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

95491946 - 95492848

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTACTAGGA

5'SS Class:

weak_major

3'SS Sequence:

TTTCATATAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATCAAAT

Flanking Amino Acid:

FWFKLLHAAVVKYYRHLAPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.1

44.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.2

0.48

0.9

67.3

37.6

Minor 5ss

31.4

-2.1

3.6

43.4

45.2

Minor BPS

0.3

1.9

79.14

42.4

Associated Gene:

Gene:

PHIP

Ensembl Gene ID:

ENSAPLG00000003512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027395

95392108 - 95492932

100825