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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95520396_95520910_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95520396 - 95520910

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTTCC

5'SS Class:

major

3'SS Sequence:

TTCTTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TAGTAATTAATT

Flanking Amino Acid:

SENGENKAEEAQKTESGPWY

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

68.8

Major BPS

0.82

0.8

24.9

Major PPT

84.5

0.78

0.7

25.6

Minor 5ss

40.5

-1.1

2.9

54.3

42.8

Minor BPS

58.9

0.36

1.8

75.64

40.7

Associated Gene:

Gene:

HMGN3

Ensembl Gene ID:

ENSAPLG00000003473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039198

95520357 - 95544077

23721

ENSAPLT00000035102

95519060 - 95544077

25018