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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95521025_95523305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95521025 - 95523305

Intron Length:

2281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

AATCTTCTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATC

Flanking Amino Acid:

PEPKPRKTTKKEPGTKANKG

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.5

0.48

70.3

40.4

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

70.5

0.62

1.1

71.62

Associated Gene:

Gene:

HMGN3

Ensembl Gene ID:

ENSAPLG00000003473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024897

95520378 - 95544077

23700

ENSAPLT00000003547

95520675 - 95544077

23403

ENSAPLT00000039198

95520357 - 95544077

23721

ENSAPLT00000035102

95519060 - 95544077

25018