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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95605084_95606189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95605084 - 95606189

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAT

5'SS Class:

major

3'SS Sequence:

GTATTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTGACTTGATT

Flanking Amino Acid:

KDMDIIQRKKANNQNTKKGA

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

82.5

0.73

0.9

76.8

37.3

Minor 5ss

39.2

-1.2

3.2

56.5

47.6

Minor BPS

60.2

0.4

1.6

76.75

Associated Gene:

Gene:

LCA5

Ensembl Gene ID:

ENSAPLG00000003360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003418

95598931 - 95615955

17025