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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95607253_95608731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95607253 - 95608731

Intron Length:

1479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTGAAG

Flanking Amino Acid:

RLEDSEKRIKDLEKNLELSG

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.3

0.57

1.1

76.4

36.6

Minor 5ss

31.9

-2.1

38.8

46.3

Minor BPS

56.3

0.05

1.8

68.54

38.7

Associated Gene:

Gene:

LCA5

Ensembl Gene ID:

ENSAPLG00000003360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003418

95598931 - 95615955

17025