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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95671315_95672465_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
95671315 - 95672465

Intron Length:
1151

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTGTC

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTTAAATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CTTTTTTTAATT

Flanking Amino Acid:
LGLKPNLASKES*

Intron Amino Acid Position:
105

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82
0.76
1.2
80.7
33.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.3
0.57
0.9
74
34.5

Minor 5ss
32.7
-2
3.2
43.9
43.8

Minor BPS
77.9
0.95
1.1
86.64
33.8

Associated Gene:

Gene:
SH3BGRL2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95639079 - 95673377
34299