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Intron Name: Anas_platyrhynchos_platyrhynchos_3_95795511_95800220_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
95795511 - 95800220

Intron Length:
4710

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGTGTAGA

5'SS Class:
strong_major

3'SS Sequence:
CCTTACTACCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGAGTTTTAATT

Flanking Amino Acid:
VAFAQFELSQGHVKKCKQLL

Intron Amino Acid Position:
160

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.9
0.8
0.9
75.8
35.3

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
65.9
0.36
0.9
58.3
37.2

Minor 5ss
35.7
-1.6
2.6
42.3
44.5

Minor BPS
62.6
0.47
1.3
72.55
39.1

Associated Gene:

Gene:
TTK

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95789094 - 95817519
28426