Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_95809349_95809987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95809349 - 95809987

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

AACTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ACTGATTTAACT

Flanking Amino Acid:

KQIGSGGSSKVFQVLNEKKQ

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

76.2

0.59

0.9

69.3

40.8

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

61.5

0.44

1.6

74.83

42.2

Associated Gene:

Gene:

TTK

Ensembl Gene ID:

ENSAPLG00000006086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006329

95789094 - 95817519

28426