Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_95865231_95866762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95865231 - 95866762

Intron Length:

1532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTGTTCTTATTT

Flanking Amino Acid:

DNALAKDPTAVIFGEDVAFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.9

0.7

88.2

28.6

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

0.46

1.6

74.68

43.1

Associated Gene:

Gene:

BCKDHB

Ensembl Gene ID:

ENSAPLG00000006305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045591

95864993 - 95903998

39006

ENSAPLT00000006557

95864993 - 95979454

114462