Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_95866832_95883163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95866832 - 95883163

Intron Length:

16332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TATTAAAGAAAT

Flanking Amino Acid:

RCTVGLRDKYGKDRVFNTPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

40.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

84.5

0.78

0.7

79.8

32.3

Minor 5ss

43.3

-0.7

2.9

52.3

45.8

Minor BPS

43.3

-0.4

2.1

67.7

41.4

Associated Gene:

Gene:

BCKDHB

Ensembl Gene ID:

ENSAPLG00000006305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006557

95864993 - 95979454

114462

ENSAPLT00000045591

95864993 - 95903998

39006