Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_95896740_95900227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95896740 - 95900227

Intron Length:

3488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTGGTGATAATA

Flanking Amino Acid:

DVTMVAWGTQVHVIKEVAAM

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.9

38.6

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

83.8

0.76

0.8

80.8

36.8

Minor 5ss

30.5

-2.2

2.5

33.4

41.8

Minor BPS

44.3

-0.4

2.3

58.98

41.7

Associated Gene:

Gene:

BCKDHB

Ensembl Gene ID:

ENSAPLG00000006305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045591

95864993 - 95903998

39006

ENSAPLT00000006557

95864993 - 95979454

114462