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Intron Name: Anas_platyrhynchos_platyrhynchos_3_96166290_96169330_F

Intron Information:

Intron Rank:

130140

Intron Class:

major

Intron Phase:

Intron Coordinates:

96166290 - 96169330

Intron Length:

3041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CCATGCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

GGTTCATAAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

0.4

1.1

66.5

36.3

Major PPT

75.3

0.57

0.9

67.9

37.5

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

48.4

-0

2.2

70.8

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030316

96165210 - 96169820

4611