Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_96167441_96169330_F

Intron Information:

Intron Rank:

130141

Intron Class:

major

Intron Phase:

Intron Coordinates:

96167441 - 96169330

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CCATGCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

GGTTCATAAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

0.4

1.1

66.5

36.3

Major PPT

75.3

0.57

0.9

67.9

37.5

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

48.4

-0

2.2

70.8

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040633

96167026 - 96258024

90999