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Intron Name: Anas_platyrhynchos_platyrhynchos_3_9627664_9632268_F

Intron Information:

Intron Rank:

125581

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9627664 - 9632268

Intron Length:

4605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAATC

5'SS Class:

major

3'SS Sequence:

ATGGGTGGCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TGTCACCTAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

72.5

37.2

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

53.6

0.08

1.1

46.2

45.3

Minor 5ss

36.3

-1.6

3.3

51.9

44.8

Minor BPS

45.3

-0.4

2.1

55.85

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029551

9626685 - 9632366

5682