Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_96664684_96670781_F

Intron Information:

Intron Rank:

146449

Intron Class:

major

Intron Phase:

Intron Coordinates:

96664684 - 96670781

Intron Length:

6098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGGC

5'SS Class:

major

3'SS Sequence:

ATGTTTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

CCCATTACAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.2

62.4

43.6

Major BPS

64.7

0.37

31.5

Major PPT

79.5

0.66

0.9

70.8

40.5

Minor 5ss

37.5

-1.4

3.4

53.1

44.1

Minor BPS

42.5

-0.4

1.7

52.63

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019137

96658875 - 96670839

11965