Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_96792977_96793349_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96792977 - 96793349

Intron Length:

373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAGG

5'SS Class:

major

3'SS Sequence:

TCTTATTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTGTTCTTATTT

Flanking Amino Acid:

SDIIQSPASTGSIKLDKTNS

Intron Amino Acid Position:

1011

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.3

72.7

44.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.4

0.71

0.7

80.7

30.9

Minor 5ss

30.5

-2.2

2.5

34.4

41.1

Minor BPS

0.46

1.6

74.68

43.1

Associated Gene:

Gene:

IBTK

Ensembl Gene ID:

ENSAPLG00000003222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026229

96774097 - 96827126

53030

ENSAPLT00000003318

96774097 - 96827126

53030