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Intron Name: Anas_platyrhynchos_platyrhynchos_3_96797205_96797578_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
96797205 - 96797578

Intron Length:
374

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGCCAGTA

5'SS Class:
major

3'SS Sequence:
CTTTGTTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAT

U12 Branch Point Sequence:
TTGTCTGTGATG

Flanking Amino Acid:
LYTDEALAIKDSQNVEFICN

Intron Amino Acid Position:
837

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.9
0.35
1.2
62.3
38.4

Major BPS
84.8
0.86
1
85.7
34.9

Major PPT
88.1
0.86
0.8
80.3
37.3

Minor 5ss
33
-1.9
3.6
47
48.4

Minor BPS
49.7
-0.1
2.1
61.34
41.8

Associated Gene:

Gene:
IBTK

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

96774097 - 96827126
53030

96774097 - 96827126
53030