Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_96813553_96815201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96813553 - 96815201

Intron Length:

1649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTAG

5'SS Class:

major

3'SS Sequence:

CCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TTTTTTGTACCT

Flanking Amino Acid:

FPRNSIYIKQVVLCKFHSVF

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.4

40.9

Major BPS

61.6

0.29

1.4

63.4

Major PPT

89.8

0.89

0.6

Minor 5ss

49.4

-0

2.5

64.1

47.4

Minor BPS

54.3

0.21

2.2

82.56

39.6

Associated Gene:

Gene:

IBTK

Ensembl Gene ID:

ENSAPLG00000003222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026229

96774097 - 96827126

53030

ENSAPLT00000003318

96774097 - 96827126

53030