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Intron Name: Anas_platyrhynchos_platyrhynchos_3_9703317_9705410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

9703317 - 9705410

Intron Length:

2094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

CGCCACTCACCC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

64.9

0.37

29.8

Major PPT

85.2

0.79

0.7

24.1

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

41.5

-0.6

1.9

45.77

42.4

Associated Gene:

Gene:

MEIS1

Ensembl Gene ID:

ENSAPLG00000009141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043259

9702317 - 9806518

104202

ENSAPLT00000009586

9702317 - 9805674

103358