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Intron Name: Anas_platyrhynchos_platyrhynchos_3_9705865_9707096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9705865 - 9707096

Intron Length:

1232

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCGCTTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CGTTGTTAAAAA

Flanking Amino Acid:

QPMIDQSNRAVSQGTPYNPD

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.7

86.2

27.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

77.8

0.62

0.9

68.7

Minor 5ss

25.2

-2.9

3.7

36.3

40.6

Minor BPS

45.3

-0.3

2.1

56.56

Associated Gene:

Gene:

MEIS1

Ensembl Gene ID:

ENSAPLG00000009141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035691

9702110 - 9900105

197996

ENSAPLT00000018791

9702110 - 9806518

104409

ENSAPLT00000009586

9702317 - 9805674

103358

ENSAPLT00000043259

9702317 - 9806518

104202