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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97104299_97105531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97104299 - 97105531

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCCTG

5'SS Class:

major

3'SS Sequence:

ATTTGTTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATG

Flanking Amino Acid:

LISALGKLNKVLQNNAKYQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

65.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.8

0.62

77.4

41.2

Minor 5ss

47.6

-0.2

2.8

64.4

Minor BPS

83.3

0.91

1.1

82.74

31.8

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119