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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97117783_97118514_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97117783 - 97118514

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGACAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AAAAATTTAAAA

Flanking Amino Acid:

SFNKDHTQLSSKLRENKKTA

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

45.4

Major BPS

81.6

0.78

0.8

24.9

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

39.1

-1.2

3.3

57.4

46.9

Minor BPS

48.6

-0.1

1.6

55.52

36.1

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033883

97104107 - 97155225

51119

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065