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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97118635_97120268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97118635 - 97120268

Intron Length:

1634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGAATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATGTCATGAAAC

Flanking Amino Acid:

YIARWFEECCRRTLHARLQT

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

79.4

0.66

0.9

73.3

41.5

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

51.1

0.01

1.8

64.79

39.9

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119