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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97120384_97121226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97120384 - 97121226

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

ATATCTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TTTGGTACAACT

Flanking Amino Acid:

VDFLLDIVSLETYIEIQTEH

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.9

32.8

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

75.3

0.57

0.9

39.6

Minor 5ss

36.3

-1.6

41.5

Minor BPS

45.9

-0.2

2.2

72.75

44.3

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033883

97104107 - 97155225

51119

ENSAPLT00000024497

97104107 - 97155225

51119