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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97121461_97124123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97121461 - 97124123

Intron Length:

2663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTATCTTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCTATCTTAATT

Flanking Amino Acid:

SSIKEWENKKVPSASLDNPN

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

73.1

0.58

79.6

29.1

Major PPT

66.8

0.38

67.5

37.8

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

75.2

0.87

1.2

83.96

37.3

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119