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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97133260_97133966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97133260 - 97133966

Intron Length:

707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGTGTACA

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCTTTAAG

Flanking Amino Acid:

HFMQKFSCADAFSHVPVSQG

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

0.9

71.2

33.6

Major BPS

100

1.24

0.5

100

Major PPT

79.3

0.66

83.6

31.9

Minor 5ss

36.8

-1.5

2.5

39.8

40.9

Minor BPS

62.2

0.24

1.8

72.26

40.2

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119