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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97142821_97144395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97142821 - 97144395

Intron Length:

1575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

AAGTTCTTAAAA

Flanking Amino Acid:

ENKKDQRDLQDVTHKIVDAI

Intron Amino Acid Position:

1976

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

92.8

0.96

0.6

92.6

17.4

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

65.9

0.5

1.4

68.06

37.8

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119