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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97146354_97146971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97146354 - 97146971

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTGATGTTAGTC

Flanking Amino Acid:

HDKTTFRDLMTRVAVAQSSS

Intron Amino Acid Position:

2158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

45.2

-0.3

2.2

58.11

41.5

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024497

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119