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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97147125_97148290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97147125 - 97148290

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TATTCTGAACTG

Flanking Amino Acid:

QYQKYLPDIQERLVESLRLP

Intron Amino Acid Position:

2209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

81.4

32.7

Major BPS

82.1

0.8

71.6

36.4

Major PPT

89.4

0.89

0.8

29.4

Minor 5ss

31.4

-2.1

2.5

36.7

40.4

Minor BPS

41.2

-0.8

2.4

51.34

44.1

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007442

97104161 - 97155225

51065

ENSAPLT00000033883

97104107 - 97155225

51119

ENSAPLT00000024497

97104107 - 97155225

51119