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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97153197_97154919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97153197 - 97154919

Intron Length:

1723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TTGTCCTGCATT

Flanking Amino Acid:

LEGLEMAKHQKNPEEDSSGK

Intron Amino Acid Position:

2392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

85.8

0.81

0.8

30.9

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

59.9

0.39

1.9

80.61

41.6

Associated Gene:

Gene:

DOP1A

Ensembl Gene ID:

ENSAPLG00000007126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033883

97104107 - 97155225

51119

ENSAPLT00000007442

97104161 - 97155225

51065