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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97159139_97159645_R


Intron Information:

Intron Rank:
7

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
97159139 - 97159645

Intron Length:
507

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTCTCT

5'SS Class:
weak_major

3'SS Sequence:
CCCTGCATTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TATCCCTGCATT

Flanking Amino Acid:
STRYLEETLQVPVHCVKTGV

Intron Amino Acid Position:
344

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.1
0.52
1.1
66.9
39.1

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
68.4
0.42
0.9
61.8
33.4

Minor 5ss
59.3
0.31
2.3
74.9
41.1

Minor BPS
53.8
0.2
1.9
75.86
40.6

Associated Gene:

Gene:
PGM3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97156594 - 97164524
7931