Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97163692_97164318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97163692 - 97164318

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGTAT

U12 Branch Point Sequence:

TTTCCTTCTAAG

Flanking Amino Acid:

VMVTASHNPEEDNGVKLVDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.2

Major BPS

59.8

0.24

1.5

60.1

46.3

Major PPT

71.5

0.49

75.5

33.3

Minor 5ss

35.5

-1.6

2.9

42.3

38.1

Minor BPS

46.3

-0.4

58.57

42.7

Associated Gene:

Gene:

PGM3

Ensembl Gene ID:

ENSAPLG00000007722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008027

97156594 - 97164524

7931