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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97193129_97202989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97193129 - 97202989

Intron Length:

9861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

CAAAGATAAACT

Flanking Amino Acid:

KYCTFNDDIQGTASVAVAGL

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

31.4

Major BPS

63.9

0.34

1.2

40.9

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

33.8

-1.8

2.9

43.3

43.9

Minor BPS

41.3

-0.5

2.2

55.92

45.5

Associated Gene:

Gene:

ME1

Ensembl Gene ID:

ENSAPLG00000008240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030022

97168618 - 97311705

143088

ENSAPLT00000022938

97168618 - 97358688

190071

ENSAPLT00000008628

97168406 - 97365005

196600