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Intron Name: Anas_platyrhynchos_platyrhynchos_3_9724068_9780401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9724068 - 9780401

Intron Length:

56334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTCTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTGTTTTAAAT

Flanking Amino Acid:

SHSGDNSSEQAPLPFRRTEK

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.1

0.5

0.9

65.5

41.2

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

64.5

0.53

1.5

78.79

37.6

Associated Gene:

Gene:

MEIS1

Ensembl Gene ID:

ENSAPLG00000009141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046105

9705862 - 9802719

96858

ENSAPLT00000025473

9707147 - 9802719

95573